PPDB

 The Plant Proteome Database

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AT4G27800.1   thylakoid-associated phosphatase 38
Lab Annot. TAP38, protein phosphatase 2C, involved in LHCII dephosphorylation
Mapman: 1.1.30 PS.lightreaction.state transition
Curated Location thylakoid-peripheral-stromal-side (Pubmed: 23198870 20126264 20176943 )

TAIR curated location: nucleolus & nucleus & cytoplasm15610358
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27800.2 11Arabidopsis thaliana033310010013 (8)M
AT4G27800.3 11Arabidopsis thaliana0325999913 (8)M
AT4G31860.1 11Arabidopsis thaliana5E-3132930470 (0)_
Os01g37130.2 7Oryza sativa5E-157332628314 (14)M
Os01g37130.1 7Oryza sativa2E-155333628210 (10)M
Os06g44210.1 7Oryza sativa3E-3234730450 (0)_
Zm00001eb162530_P002 agpv5Zea mays2E-151394547312 (12)M
v1_GRMZM2G372297_P01 4a53Zea mays2E-151394547317 (17)M
GRMZM2G372297_P01 3.21Zea mays2E-151394547328 (28)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ion_trans_N(1) PP2C(1) PP2C_2(1)
TargetP: Mitochondria (Class 1 C0.049; M0.927; S0.016; _0.126)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 388 aa (-cTP 346)
Molecular Weight 42.72 kDA(-cTP )
PI 5.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1617Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1625Detail       Rosettes [A. thaliana] Wild-type
1626Detail       Rosettes [A. thaliana] k1xk3
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1628Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1630Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1676Detail       Rosettes [A. thaliana]  
1679Detail       Rosettes [A. thaliana]  
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1832Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1933Detail       leaf [A. thaliana] chloroplast wild-type
1936Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1937Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2319Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
17216043(leaf)
21693672(wound-regulated leaf proteome (AOS mutant))

Comparative Proteomics Data

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