PPDB

 The Plant Proteome Database

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AT4G27690.1   vacuolar protein sorting 26B
Lab Annot. vacuolar protein sorting-associated protein 26, putative / VPS26, putative
Mapman: 29.3.4.3 protein.targeting.secretory pathway.vacuole
Curated Location vacuole
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G53530.1 11Arabidopsis thaliana0302919517 (5)_
AT4G27690.2 11Arabidopsis thaliana02751001005 (1)_
Os12g31640.1 6Oryza sativa8E-17730575890 (0)C
Os11g41130.1 6Oryza sativa2E-17530375897 (7)_
Os11g41130.2 7Oryza sativa2E-156266788910 (10)_
Zm00001eb409480_P001 agpv5Zea mays030378910 (0)_
v1_GRMZM2G121948_P01 4a53Zea mays7E-18030377890 (0)_
v1_GRMZM2G121948_P02 4a53Zea mays7E-18030377890 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Arrestin_C(2) Arrestin_N(3) Vps26(1)
TargetP: Cytoplasm (Class 5 C0.308; M0.133; S0.168; _0.487)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 303 aa (-cTP 277)
Molecular Weight 35.20 kDA(-cTP )
PI 7.02(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

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