PPDB

 The Plant Proteome Database

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AT4G27680.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein
Lab Annot. MSP1 protein, putative / intramitochondrial sorting protein, putative
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G53540.1 11Arabidopsis thaliana039480907 (7)S
AT4G02480.1 11Arabidopsis thaliana2E-9032049652 (1)C
AT1G02890.1 11Arabidopsis thaliana3E-8927051710 (0)C
Os06g50050.1 7Oryza sativa0389748421 (21)S
Os06g50050.2 6Oryza sativa0354778712 (12)S
Os11g43970.1 7Oryza sativa9E-89337476314 (14)C
Zm00001eb272360_P002 agpv5Zea mays035477870 (0)S
Zm00001eb227980_P002 agpv5Zea mays035076870 (0)S
Zm00001eb272360_P003 agpv5Zea mays038973840 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_14(1) AAA_16(1) AAA_17(1) AAA_18(1) AAA_19(1) AAA_2(1) AAA_21(2) AAA_
TargetP: Secreted (Class 1 C0.011; M0.013; S0.973; _0.098)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 398 aa (-cTP 381)
Molecular Weight 44.20 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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