PPDB

The Plant Proteome Database

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AT4G27670.1   heat shock protein 21

Lab Annot. small heat shock protein sHSP25.3 (often named cpHSP21)
Mapman: 29.6 protein.folding
Curated Location plastid stroma (Pubmed: 23198870 18431481 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51440.1 11Arabidopsis thaliana3E-2713446681 (0)M
AT4G25200.1 11Arabidopsis thaliana3E-2513343631 (1)M
AT1G52560.2 11Arabidopsis thaliana2E-2415934550 (0)M
Os03g14180.1 7Oryza sativa3E-6923849670 (0)M
Os05g23140.1 7Oryza sativa7E-3025230500 (0)C
Os02g52150.1 7Oryza sativa3E-1914038556 (6)S
Zm00001eb010530_P001 agpv5Zea mays2E-7123650680 (0)C
v1_GRMZM2G149647_P01 4a53Zea mays2E-7123650681 (1)C
GRMZM2G149647_P01 3.21Zea mays2E-7123650683 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) Cathelicidins(1) FKBP26_C(2) HSP20(1)
TargetP: Chloroplast (Class 2 C0.868; M0.050; S0.090; _0.027)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 227 aa (-cTP 184)
Molecular Weight 25.34 kDA(-cTP 20.92)
PI 8.49(-cTP 5.41)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1513Detail       leaf [A. thaliana] wild-type
1542Detail       leaf [A. thaliana] wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19995723(chloroplast reference proteome)

Comparative Proteomics Data


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