PPDB

 The Plant Proteome Database

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AT4G27600.1   pfkB-like carbohydrate kinase family protein
Lab Annot. pfkB-like carbohydrate kinase NARA5 - involved in expression of photosythetic genes
Mapman: 3.5 minor CHO metabolism.others
Curated Location plastid (Pubmed: 19587101 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19600.1 11Arabidopsis thaliana3E-1331124401 (1)_
AT5G03300.1 11Arabidopsis thaliana4E-103312439262 (158)_
AT1G66430.1 11Arabidopsis thaliana2E-062772537269 (204)C
Os10g42240.1 7Oryza sativa036971850 (0)C
Os10g42240.2 7Oryza sativa2E-11722773870 (0)C
Os01g01620.1 7Oryza sativa1E-1036523410 (0)_
Zm00001eb024550_P001 agpv5Zea mays039169820 (0)C
v1_GRMZM2G121128_P01 4a53Zea mays039169820 (0)C
GRMZM2G121128_P01 3.21Zea mays039169820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PfkB(1)
TargetP: Chloroplast (Class 1 C0.901; M0.020; S0.075; _0.019)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 471 aa (-cTP 407)
Molecular Weight 50.03 kDA(-cTP 43.26)
PI 5.08(-cTP 4.76)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help