PPDB

The Plant Proteome Database

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AT4G27585.1   SPFH/Band 7/PHB domain-containing membrane-associated protein family

Lab Annot. band 7 protein
Mapman: 35.1 not assigned.no ontology
Curated Location not plastid (supported by in-house exprements)

TAIR curated location: mitochondrion14671022,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54100.1 11Arabidopsis thaliana033282875 (5)M
AT3G01290.1 11Arabidopsis thaliana2E-11212274970 (69)_
AT5G51570.1 11Arabidopsis thaliana1E-0927125436 (6)_
Os08g06200.1 7Oryza sativa3E-147414566622 (22)M
Os08g15600.1 7Oryza sativa4E-277173810 (0)M
Os10g32700.1 7Oryza sativa5E-0928025430 (0)S
GRMZM2G023073_P02 3.21Zea mays1E-146366607420 (20)M
Zm00001eb415710_P001 agpv5Zea mays1E-14636660740 (0)M
v1_GRMZM2G465069_P01 4a53Zea mays6E-146350607516 (16)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Band_7(2) Band_7_1(1) Band_7_C(1) DivIVA(1)
TargetP: Mitochondria (Class 3 C0.298; M0.704; S0.027; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 411 aa (-cTP 366)
Molecular Weight 45.02 kDA(-cTP )
PI 6.35(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1618Detail        [A. thaliana] m48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2250Detail       seedlings [A. thaliana] total tissue atg5
2253Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2275Detail       seedlings [A. thaliana] total tissue wild-type
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
18385124(mitochondria - leaf and suspension cell)
17432890(leaf total membranes)
18385124(mitochondria)
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19200160(flower-stage 12)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
20018591(Zn2+ binding (mitochondria - cell culture))
21533090(plasmodesmata-crude)
21311031(mitochondria)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


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