PPDB

The Plant Proteome Database

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AT4G27435.1   fiber (DUF1218)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15480.1 11Arabidopsis thaliana1E-7517361760 (0)S
AT1G52910.1 11Arabidopsis thaliana1E-7517460760 (0)S
AT1G61065.1 11Arabidopsis thaliana2E-6115959770 (0)S
Os07g27810.1 7Oryza sativa1E-63174627719 (19)S
Os04g58160.1 7Oryza sativa6E-6117252680 (0)S
Os04g58160.3 7Oryza sativa6E-6117252680 (0)S
v1_GRMZM2G396540_P01 4a53Zea mays3E-6216962760 (0)S
GRMZM2G396540_P01 3.21Zea mays3E-6216962762 (2)S
Zm00001eb306650_P001 agpv5Zea mays3E-6216962760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1218(2)
TargetP: Secreted (Class 1 C0.004; M0.025; S0.985; _0.039)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 3 TMs
TAT position:
Length 173 aa (-cTP 105)
Molecular Weight 19.18 kDA(-cTP )
PI 8.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help