PPDB

 The Plant Proteome Database

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AT4G27270.1   Quinone reductase family protein
Lab Annot. quinone reductase protein
Mapman: 11.8 lipid metabolism.exotics (steroids, squalene etc)
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27270.3 11Arabidopsis thaliana1E-1401941001000 (0)_
AT4G27270.2 11Arabidopsis thaliana1E-1401941001000 (0)_
AT5G54500.1 11Arabidopsis thaliana3E-1372049196201 (129)_
Os08g04460.1 7Oryza sativa1E-125203859045 (45)S
Os05g42190.1 7Oryza sativa7E-11720576866 (6)S
Os01g57570.1 7Oryza sativa4E-115203778533 (33)S
Zm00001eb352760_P004 agpv5Zea mays2E-11620476870 (0)S
GRMZM2G082792_P01 3.21Zea mays2E-116204768732 (32)S
v1_GRMZM2G082792_P01 4a53Zea mays2E-116204768731 (31)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Flavodoxin_1(1) Flavodoxin_2(1) Flavodoxin_5(2) FMN_red(1)
TargetP: Cytoplasm (Class 5 C0.039; M0.099; S0.409; _0.547)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 205 aa (-cTP 181)
Molecular Weight 21.79 kDA(-cTP )
PI 6.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 15060130(Plasma Membrane proteome)
17317660(Plasma Membrane proteome)
17828791(total leaf)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
19888209(leaves)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help