PPDB

The Plant Proteome Database

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AT4G27160.1   seed storage albumin 3

Lab Annot. seed storage albumin 3
Mapman: 33.1 development.storage proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27150.1 11Arabidopsis thaliana3E-100170859217 (9)S
AT4G27170.1 11Arabidopsis thaliana1E-8916978858 (4)S
AT4G27140.1 11Arabidopsis thaliana7E-7317268765 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Tryp_alpha_amyl(2)
TargetP: Secreted (Class 1 C0.014; M0.009; S0.984; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 164 aa (-cTP 101)
Molecular Weight 18.76 kDA(-cTP )
PI 8.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
2246Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
18796151(cell wall (hypocotyl))
19334764(plasma membrane (cell culture))
20516081(tagged-26S proteasome-affinity)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help