PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G27080.1 PDI-like 5-4

Lab Annot.

Mapman: 21.1 redox.thioredoxin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G27080.2 11 Arabidopsis thaliana 0 467 99 100 3 (3) _
AT3G20560.1 11 Arabidopsis thaliana 0 482 73 87 0 (0) _
AT1G50950.1 11 Arabidopsis thaliana 0 483 69 84 0 (0) _
Os07g34030.1 7 Oryza sativa 0 484 70 85 0 (0) _
Os07g34030.2 7 Oryza sativa 0 393 65 80 0 (0) _
Os03g20520.1 7 Oryza sativa 2E-20 200 32 50 1 (1) _
GRMZM2G067063_P03 3.21 Zea mays 0 437 66 82 1 (1) _
v1_GRMZM2G067063_P03 4a53 Zea mays 0 437 66 82 0 (0) _
Zm00001eb106180_P006 agpv5 Zea mays 0 435 66 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cauli_AT(1) COPIIcoated_ERV(2) ERGIC_N(1) OST3_OST6(1) Thioredoxin(1) Thioredoxi
TargetP:	Cytoplasm (Class 3 C0.017; M0.334; S0.083; _0.768)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	480 aa (-cTP 399)
Molecular Weight	53.89 kDA(-cTP )
PI	6.58(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1575	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1579	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1581	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data