PPDB

The Plant Proteome Database

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AT4G27010.1   ribosome 60S biogenesis amino-terminal protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G27010.2 11Arabidopsis thaliana0240298980 (0)_
AT1G72270.1 11Arabidopsis thaliana0179772818 (8)_
Os04g53380.1 7Oryza sativa0253434513 (3)_
Zm00001eb070180_P001 agpv5Zea mays0252533520 (0)_
Zm00001eb070180_P003 agpv5Zea mays0252533520 (0)_
Zm00001eb070180_P002 agpv5Zea mays0252532520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NopRA1(3) Npa1(1)
TargetP: Cytoplasm (Class 2 C0.041; M0.061; S0.216; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 5 TMs
TAT position:
Length 2374 aa (-cTP 2357)
Molecular Weight 266.63 kDA(-cTP )
PI 5.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(epidermis)
19245862(nuclear phosphoproteins (seedlings & cell culture))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help