PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G26990.1   polyadenylate-binding protein interacting protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G54920.1 11Arabidopsis thaliana3E-15549453660 (0)C
AT5G54920.2 11Arabidopsis thaliana1E-15449953650 (0)C
AT3G14010.1 11Arabidopsis thaliana1E-118939602 (2)C
Os04g53450.1 7Oryza sativa2E-3044330430 (0)C
Os02g27950.2 7Oryza sativa5E-0988355730 (30)C
Os02g27950.1 7Oryza sativa5E-0988355730 (30)C
GRMZM2G150901_P03 3.21Zea mays2E-3040030460 (0)M
Zm00001eb431320_P001 agpv5Zea mays2E-3040030460 (0)M
v1_GRMZM2G150901_P03 4a53Zea mays2E-3040030460 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Anth_Ig(2) LSM(1) PAM2(1) SM-ATX(2)
TargetP: Cytoplasm (Class 1 C0.081; M0.093; S0.026; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 3 TMs
TAT position:
Length 474 aa (-cTP 451)
Molecular Weight 50.52 kDA(-cTP )
PI 8.18(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help