PPDB

PPDB	The Plant Proteome Database

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AT4G26910.1 Dihydrolipoamide succinyltransferase

Lab Annot.

dihydrolipoamide succinyltransferase - part of OGDC
Mapman: 8.1 TCA / org.transformation.TCA

Curated Location

mitochondria

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G26910.2 11 Arabidopsis thaliana 0 464 99 99 66 (31) M
AT4G26910.3 11 Arabidopsis thaliana 0 365 100 100 58 (23) _
AT5G55070.1 11 Arabidopsis thaliana 0 469 80 84 119 (66) M
Os04g32330.2 7 Oryza sativa 0 426 71 82 30 (30) M
Os04g32330.1 7 Oryza sativa 0 427 70 82 30 (30) M
Os02g31040.1 7 Oryza sativa 0 382 70 80 0 (0) M
GRMZM2G079538_P02 3.21 Zea mays 0 452 67 78 42 (24) M
Zm00001eb421290_P002 agpv5 Zea mays 0 452 67 78 0 (0) M
v1_GRMZM2G079538_P02 4a53 Zea mays 0 452 67 78 35 (34) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-oxoacid_dh(1) Biotin_lipoyl(1) Biotin_lipoyl_2(2) DUF3729(1) GCV_H(1) HlyD_2(2
TargetP:	Mitochondria (Class 5 C0.631; M0.716; S0.002; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	464 aa (-cTP 455)
Molecular Weight	50.06 kDA(-cTP )
PI	9.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1717	Detail								[A. thaliana]
1720	Detail								[A. thaliana]
1756	Detail								leaf [A. thaliana]	total leaf tissue	Col_0
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2263	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 trap
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2299	Detail								[A. thaliana]		Clp C1 TRAP
2300	Detail								[A. thaliana]		Clp C1 TRAP
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15276431(Mitochondrial proteome)
15276431(mitochondrial membranes-suspension cells)
18385124(mitochondria - leaf and suspension cell)
17432890(leaf total membranes)
18385124(mitochondria)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20018591(Zn2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data