PPDB

 The Plant Proteome Database

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AT4G26780.1   Co-chaperone GrpE family protein
Lab Annot. chaperone GrpE type 2
Mapman: 29.6 protein.folding
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G55200.1 11Arabidopsis thaliana4E-130332597117 (11)M
AT5G17710.1 11Arabidopsis thaliana1E-091532844580 (391)C
AT5G17710.3 11Arabidopsis thaliana1E-0915328440 (0)C
Os08g25090.1 7Oryza sativa1E-99274597322 (22)M
Os09g11250.1 7Oryza sativa4E-9622264817 (7)M
Os08g25090.2 7Oryza sativa1E-92266567221 (21)M
Zm00001eb177440_P003 agpv5Zea mays5E-9827657740 (0)M
GRMZM2G002440_P01 3.21Zea mays5E-98276577428 (27)M
v1_GRMZM2G002440_P01 4a53Zea mays5E-98276577419 (19)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CC2-LZ(1) Cwf_Cwc_15(1) DUF1456(2) FAM76(1) GrpE(1) HTH_53(1) IZUMO(1) Noelin-1(
TargetP: Mitochondria (Class 2 C0.222; M0.853; S0.004; _0.011)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 327 aa (-cTP 310)
Molecular Weight 36.12 kDA(-cTP )
PI 5.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1557Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1567Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1568Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1574Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1576Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1695Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1697Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1712Detail       Rosettes [A. thaliana] Thylakoids thylakoid membraneWild-type
1716Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek5-1
1744Detail        [A. thaliana] Mep-6
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2246Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20018591(strong Cu2+ binding (mitochondria - cell culture))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help