PPDB

The Plant Proteome Database

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AT4G26650.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G26650.2 11Arabidopsis thaliana04511001001 (1)_
AT5G55550.5 11Arabidopsis thaliana045475830 (0)_
AT5G55550.1 11Arabidopsis thaliana045475830 (0)_
Os07g39560.3 7Oryza sativa2E-11849145580 (0)_
Os07g39560.1 7Oryza sativa2E-11849145580 (0)_
Os07g39560.2 7Oryza sativa2E-11849145580 (0)_
GRMZM2G162954_P01 3.21Zea mays2E-11349445605 (5)_
v1_GRMZM2G162954_P01 4a53Zea mays2E-11349445607 (7)_
Zm00001eb302640_P001 agpv5Zea mays2E-11349445600 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PHM7_cyt(4) RL(1) RRM_1(2) RRM_7(2)
TargetP: Cytoplasm (Class 1 C0.100; M0.041; S0.096; _0.958)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 455 aa (-cTP 432)
Molecular Weight 49.40 kDA(-cTP )
PI 6.22(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2300Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help