PPDB

PPDB	The Plant Proteome Database

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AT4G26400.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G26400.2 11 Arabidopsis thaliana 0 356 100 100 3 (3) S
AT5G56340.1 11 Arabidopsis thaliana 1E-131 368 61 71 1 (1) _
AT1G55530.1 11 Arabidopsis thaliana 2E-91 380 43 56 0 (0) _
Os05g40980.1 7 Oryza sativa 7E-57 361 36 49 0 (0) _
Os05g40980.2 7 Oryza sativa 2E-49 343 36 49 0 (0) _
Os03g59760.2 7 Oryza sativa 5E-44 176 45 64 0 (0) _
v1_GRMZM2G124441_P01 4a53 Zea mays 1E-58 379 35 50 0 (0) _
Zm00001eb212150_P001 agpv5 Zea mays 1E-58 379 35 50 0 (0) _
GRMZM2G124441_P01 3.21 Zea mays 1E-58 379 35 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CDC24_OB3(2) DZR(2) FANCL_C(2) Prok-RING_4(2) Rad50_zn_hook(2) UBZ_FAAP20(3) zf-
TargetP:	Secreted (Class 4 C0.065; M0.126; S0.445; _0.191)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	356 aa (-cTP 346)
Molecular Weight	40.21 kDA(-cTP )
PI	5.83(-cTP )

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data