PPDB

The Plant Proteome Database

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AT4G26130.1   cotton fiber protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G56980.1 11Arabidopsis thaliana2E-6937945521 (1)S
AT2G26110.1 11Arabidopsis thaliana5E-2530131460 (0)_
Os05g46340.1 7Oryza sativa7E-0910137510 (0)_
Os01g51310.1 7Oryza sativa2E-064252690 (0)_
v1_GRMZM2G476230_P01 4a53Zea mays5E-1930926430 (0)S
Zm00001eb383930_P001 agpv5Zea mays5E-1930926430 (0)S
GRMZM2G476230_P01 3.21Zea mays5E-1930926430 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4408(1) DUF761(4) Rgp1(1)
TargetP: Secreted (Class 3 C0.014; M0.082; S0.647; _0.171)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 286 aa (-cTP 251)
Molecular Weight 32.76 kDA(-cTP )
PI 8.95(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help