PPDB

PPDB	The Plant Proteome Database

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AT4G25970.1 phosphatidylserine decarboxylase 3

Lab Annot.

PSD3 (PHOSPHATIDYLSERINE DECARBOXYLASE 3); calcium ion binding / phosphatidylserine decarboxylase
Mapman: 11.3.8 lipid metabolism.Phospholipid synthesis.phosphatidylserine decarboxylase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57190.1 11 Arabidopsis thaliana 0 626 85 93 0 (0) M
AT5G57190.2 11 Arabidopsis thaliana 0 585 85 93 0 (0) M
AT4G16700.1 11 Arabidopsis thaliana 5E-13 272 26 40 0 (0) M
Os01g72940.1 7 Oryza sativa 0 637 61 72 0 (0) C
Os03g01216.1 7 Oryza sativa 3E-13 269 29 40 0 (0) M
Zm00001eb362570_P003 agpv5 Zea mays 0 585 69 84 0 (0) M
Zm00001eb362570_P002 agpv5 Zea mays 0 479 66 83 0 (0) M
GRMZM2G133885_P01 3.21 Zea mays 0 329 74 88 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C2(1) EF-hand_1(2) EF-hand_4(2) EF-hand_5(2) EF-hand_6(2) EF-hand_7(2) EF-hand_8
TargetP:	Chloroplast (Class 2 C0.858; M0.131; S0.017; _0.196)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	635 aa (-cTP 587)
Molecular Weight	70.35 kDA(-cTP 65.02)
PI	5.38(-cTP 4.88)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1616	Detail								Natural Senescence leaf [A. thaliana]
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data