PPDB

 The Plant Proteome Database

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AT4G25910.1   NFU domain protein 3
Lab Annot. NFU3 - Fe-S assembly - scaffold
Mapman: 29.8.1* protein assembly and cofactor ligation.Fe-S assembly
Curated Location plastid stroma (Pubmed: 23198870 15031412 18431481 )

TAIR curated location: chloroplast12553879
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49940.1 11Arabidopsis thaliana2E-76198617524 (17)C
AT5G49940.2 11Arabidopsis thaliana1E-4193758812 (8)C
AT4G01940.1 11Arabidopsis thaliana3E-23142386143 (34)C
Os06g47940.1 7Oryza sativa2E-8718074842 (2)C
Os11g07916.1 7Oryza sativa1E-7720063720 (0)C
Os12g07700.1 7Oryza sativa4E-6615468820 (0)C
GRMZM2G100976_P01 3.21Zea mays2E-87195698116 (14)_
Zm00001eb273230_P001 agpv5Zea mays2E-8719569810 (0)_
v1_GRMZM2G100976_P01 4a53Zea mays2E-87195698116 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: cwf21(2) NifU(2)
TargetP: Chloroplast (Class 2 C0.873; M0.061; S0.004; _0.110)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 236 aa (-cTP 137)
Molecular Weight 25.66 kDA(-cTP 14.52)
PI 6.46(-cTP 4.74)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1351Detail       leaf [A. thaliana] total tissue t1-t2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1870Detail       Total leaf [A. thaliana] Stroma wild-type
2031Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2035Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 19995723(chloroplast reference proteome)

Comparative Proteomics Data

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