PPDB

 The Plant Proteome Database

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AT4G25840.1   glycerol-3-phosphatase 1
Lab Annot. GPP1 (GLYCEROL-3-PHOSPHATASE 1) (also named PyrP3)
Mapman: 12.2.99 N-metabolism.ammonia metabolism.unspecified
Curated Location mitochondria (Pubmed: 27490826 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G57440.1 11Arabidopsis thaliana3E-152248839129 (20)_
AT4G21470.1 11Arabidopsis thaliana2E-34225355310 (0)S
AT1G56500.1 11Arabidopsis thaliana3E-082292745398 (342)C
Os08g14580.1 7Oryza sativa3E-11723069815 (5)_
Os10g32730.2 7Oryza sativa2E-4022536560 (0)_
Os10g32730.1 7Oryza sativa2E-4022536560 (0)_
GRMZM2G102231_P02 3.21Zea mays7E-122285627416 (6)C
Zm00001eb414640_P003 agpv5Zea mays7E-12228562740 (0)C
v1_GRMZM2G102231_P02 4a53Zea mays7E-12228562745 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HAD(1) HAD_2(1) Hydrolase(1) Hydrolase_3(2) Hydrolase_6(2) Hydrolase_like(1)
TargetP: Chloroplast (Class 2 C0.807; M0.206; S0.002; _0.058)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 298 aa (-cTP 245)
Molecular Weight 33.07 kDA(-cTP 27.20)
PI 7.83(-cTP 5.59)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1457Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1460Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 3)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2289Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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