PPDB

PPDB	The Plant Proteome Database

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AT4G25810.1 xyloglucan endotransglycosylase 6

Lab Annot.

unknown function (thioredoxin fold)
Mapman: 10.7 cell wall.modification

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G57560.1 11 Arabidopsis thaliana 9E-180 281 83 92 1 (1) S
AT5G57550.1 11 Arabidopsis thaliana 1E-147 284 67 79 3 (1) S
AT4G30270.1 11 Arabidopsis thaliana 2E-144 271 71 81 94 (58) S
Os06g48200.1 7 Oryza sativa 6E-137 272 66 80 0 (0) S
Os06g48160.1 7 Oryza sativa 4E-134 287 64 75 3 (3) S
Os06g48180.1 7 Oryza sativa 3E-128 281 61 76 0 (0) S
v1_GRMZM2G166944_P01 4a53 Zea mays 6E-136 275 66 80 0 (0) S
Zm00001eb226490_P002 agpv5 Zea mays 6E-136 275 66 80 0 (0) S
GRMZM2G166944_P01 3.21 Zea mays 6E-136 275 66 80 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_16(1) XET_C(1)
TargetP:	Secreted (Class 1 C0.012; M0.013; S0.988; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	286 aa (-cTP 276)
Molecular Weight	32.06 kDA(-cTP )
PI	5.05(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
18998720(SA-induced secreted proteome (cell culture))
18716313(secreted proteins (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))
22430844(Golgi-cell-culture)

Comparative Proteomics Data