PPDB

 The Plant Proteome Database

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AT4G25750.1   ABC-2 type transporter family protein
Lab Annot.
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52860.1 11Arabidopsis thaliana058081880 (0)C
AT5G19410.2 11Arabidopsis thaliana1E-17058842680 (0)C
AT5G19410.1 11Arabidopsis thaliana2E-17058842680 (0)C
Os06g30730.1 7Oryza sativa060054700 (0)_
Os05g31910.1 7Oryza sativa3E-15962042610 (0)C
Os01g42900.1 7Oryza sativa2E-15258641610 (0)C
Zm00001eb372940_P002 agpv5Zea mays059754710 (0)_
GRMZM5G874756_P01 3.21Zea mays059754710 (0)_
Zm00001eb162070_P001 agpv5Zea mays4E-16359042630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_28(1) AAA_29(1) AAA_30(1)
TargetP: Cytoplasm (Class 4 C0.172; M0.026; S0.055; _0.482)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 6 TMs
TAT position:
Length 577 aa (-cTP 527)
Molecular Weight 64.69 kDA(-cTP )
PI 9.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help