PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G25720.1   glutaminyl cyclase
Lab Annot.
Mapman: 26.1 misc.misc2
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25720.3 11Arabidopsis thaliana032093938 (2)M
AT4G25720.2 11Arabidopsis thaliana02891001008 (2)M
AT4G25720.4 11Arabidopsis thaliana02711001000 (0)M
Os06g01410.1 7Oryza sativa9E-10924261750 (0)M
Zm00001eb268480_P002 agpv5Zea mays8E-11524963770 (0)C
GRMZM2G011893_P02 3.21Zea mays8E-11524963770 (0)C
Zm00001eb268480_P003 agpv5Zea mays3E-10824961740 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glu_cyclase_2(1) SGL(2)
TargetP: Mitochondria (Class 4 C0.418; M0.767; S0.003; _0.039)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 320 aa (-cTP 278)
Molecular Weight 36.27 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(UNKNOWN-LOPIT-callus)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help