PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G25700.1   beta-hydroxylase 1
Lab Annot. beta-carotene hydroxylase 1 (betaOHase1) (CHY1)
Mapman: 16.1.4 secondary metabolism.isoprenoids.carotenoids
Curated Location plastid (Pubmed: 22513258 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52570.1 11Arabidopsis thaliana1E-16031175840 (0)C
AT4G25700.3 11Arabidopsis thaliana6E-1582151001000 (0)C
AT4G25700.2 11Arabidopsis thaliana6E-1582151001000 (0)C
Os03g03370.1 7Oryza sativa5E-12920783920 (0)M
Os10g38940.1 7Oryza sativa5E-11819480900 (0)M
Os04g48880.1 7Oryza sativa6E-11520779910 (0)C
GRMZM2G152135_P07 3.21Zea mays3E-12920781930 (0)C
Zm00001eb073250_P001 agpv5Zea mays2E-12720382940 (0)C
v1_GRMZM2G164318_P01 4a53Zea mays2E-12720382940 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FA_hydroxylase(1)
TargetP: Chloroplast (Class 2 C0.891; M0.254; S0.004; _0.025)
Predotar:
Subcel. Location: Thylakoid membrane
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position: 54
Length 310 aa (-cTP 259) (-lTP 236)
Molecular Weight 34.36 kDA(-cTP 28.71)(-lTP 26.07)
PI 9.10(-cTP 6.61)(-lTP 8.086)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help