PPDB

The Plant Proteome Database

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AT4G25680.1   PPPDE putative thiol peptidase family protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25660.1 11Arabidopsis thaliana025592960 (0)_
AT2G25190.1 11Arabidopsis thaliana1E-2214337560 (0)M
AT1G80690.1 11Arabidopsis thaliana1E-1911040610 (0)M
Os10g38970.1 7Oryza sativa4E-111220688213 (13)_
Os06g01780.1 7Oryza sativa2E-8822657740 (0)_
Os06g08360.1 7Oryza sativa3E-2520433510 (0)C
v1_GRMZM2G162292_P01 4a53Zea mays3E-11925164792 (2)_
GRMZM2G162292_P01 3.21Zea mays3E-11925164794 (4)_
Zm00001eb021890_P001 agpv5Zea mays3E-11925164790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRAT(1) Peptidase_C97(1) SymE_toxin(1)
TargetP: Cytoplasm (Class 1 C0.078; M0.104; S0.135; _0.938)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 252 aa (-cTP 238)
Molecular Weight 27.80 kDA(-cTP )
PI 8.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help