PPDB

PPDB	The Plant Proteome Database

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AT4G25650.1 ACD1-like protein

Lab Annot.

Tic55-related protein (PTC52)
Mapman: 19.50* tetrapyrrole synthesis.tetrapyrrole degradation

Curated Location

envelope-inner (Pubmed: 23198870 19995737 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25650.2 11 Arabidopsis thaliana 0 559 95 95 25 (17) C
AT3G44880.1 11 Arabidopsis thaliana 4E-78 519 33 49 50 (44) C
AT2G24820.1 11 Arabidopsis thaliana 6E-43 488 27 42 275 (266) C
Os03g59110.1 7 Oryza sativa 2E-166 475 49 65 0 (0) M
Os03g59100.1 7 Oryza sativa 1E-155 506 46 64 0 (0) M
Os03g59120.1 7 Oryza sativa 2E-144 545 43 59 0 (0) C
v1_GRMZM2G349062_P01 4a53 Zea mays 0 486 52 69 39 (39) C
GRMZM2G349062_P01 3.21 Zea mays 0 486 52 69 56 (56) C
Zm00001eb061510_P002 agpv5 Zea mays 0 486 52 69 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PaO(1) Rieske(1) VanA_C(1)
TargetP:	Chloroplast (Class 1 C0.981; M0.124; S0.008; _0.004)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	536 aa (-cTP 481)
Molecular Weight	61.26 kDA(-cTP 55.39)
PI	8.91(-cTP 8.47)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1454	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 2)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
12766230(Total chloroplast envelope)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data