PPDB

The Plant Proteome Database

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AT4G25650.1   ACD1-like protein

Lab Annot. Tic55-related protein (PTC52)
Mapman: 19.50* tetrapyrrole synthesis.tetrapyrrole degradation
Curated Location envelope-inner (Pubmed: 23198870 19995737 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25650.2 11Arabidopsis thaliana0559959517 (17)C
AT3G44880.1 11Arabidopsis thaliana4E-78519334944 (44)C
AT2G24820.1 11Arabidopsis thaliana6E-434882742267 (266)C
Os03g59110.1 7Oryza sativa2E-16647549650 (0)M
Os03g59100.1 7Oryza sativa1E-15550646640 (0)M
Os03g59120.1 7Oryza sativa2E-14454543590 (0)C
v1_GRMZM2G349062_P01 4a53Zea mays0486526939 (39)C
GRMZM2G349062_P01 3.21Zea mays0486526956 (56)C
Zm00001eb061510_P002 agpv5Zea mays048652690 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PaO(1) Rieske(1) VanA_C(1)
TargetP: Chloroplast (Class 1 C0.981; M0.124; S0.008; _0.004)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 536 aa (-cTP 481)
Molecular Weight 61.26 kDA(-cTP 55.39)
PI 8.91(-cTP 8.47)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
12766230(Total chloroplast envelope)
19334764(plasma membrane (cell culture))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help