PPDB

 The Plant Proteome Database

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AT4G25630.1   fibrillarin 2
Lab Annot. fibrillarin 2 (FIB2)
Mapman: 27.1 RNA.processing
Curated Location nucleus (Pubmed: 10829025 )

TAIR curated location: nucleolus10829025
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52470.1 11Arabidopsis thaliana1E-175242979878 (57)M
AT5G52490.1 11Arabidopsis thaliana2E-13524275850 (0)M
AT5G52470.2 11Arabidopsis thaliana2E-115164999924 (19)M
Os02g57590.1 7Oryza sativa5E-161242889415 (15)M
Os05g08360.1 7Oryza sativa2E-156238879416 (16)M
Os05g08360.2 7Oryza sativa3E-11718488933 (3)M
v1_GRMZM2G150648_P05 4a53Zea mays3E-160245869399 (99)_
GRMZM2G150648_P05 3.21Zea mays3E-160245869391 (51)_
Zm00001eb191090_P002 agpv5Zea mays1E-15624185930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Fibrillarin(1) FtsJ(1) GCD14(1) Methyltr_RsmB-F(1) PCMT(1)
TargetP: Mitochondria (Class 5 C0.104; M0.633; S0.006; _0.506)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 320 aa (-cTP 261)
Molecular Weight 33.65 kDA(-cTP )
PI 10.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1620Detail        [A. thaliana] m48
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2239Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2244Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 15496452(nucleolus)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19714877(interactomes 14-3-3 complexes (cell culture))
20706207(cell cycle interactome (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data

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