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PPDB	The Plant Proteome Database

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AT4G25580.1 CAP160 protein

Lab Annot.

CAP160 protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25580.2 11 Arabidopsis thaliana 0 597 100 100 0 (0) _
AT5G52300.1 11 Arabidopsis thaliana 1E-106 661 42 56 6 (4) _
AT5G52300.2 11 Arabidopsis thaliana 3E-105 661 42 55 7 (4) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Antimicrobial_7(2) CAP160(1) RNA_pol_3_Rpc31(2)
TargetP:	Cytoplasm (Class 4 C0.074; M0.396; S0.063; _0.772)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	626 aa (-cTP 605)
Molecular Weight	66.52 kDA(-cTP )
PI	6.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2291	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18436743(specific to seeds)
20706207(contaminants cell cycle interactome (cell culture))
21533090(plasmodesmata-crude)

Comparative Proteomics Data