PPDB

The Plant Proteome Database

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AT4G25570.1   Cytochrome b561/ferric reductase transmembrane protein family

Lab Annot. cytochrome b561-2
Mapman: 35.2 not assigned.unknown
Curated Location vacuole
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25570.2 11Arabidopsis thaliana2E-1712391001000 (0)_
AT5G38630.1 11Arabidopsis thaliana1E-5920245660 (0)S
AT1G14730.1 11Arabidopsis thaliana2E-4120135581 (1)S
Os02g42890.1 7Oryza sativa1E-9022564760 (0)S
Os04g45090.2 7Oryza sativa2E-7817665780 (0)S
Os10g36030.1 7Oryza sativa1E-7019562742 (2)S
v1_GRMZM2G060357_P01 4a53Zea mays3E-90199667817 (17)S
Zm00001eb185950_P001 agpv5Zea mays3E-9019966780 (0)S
GRMZM2G060357_P01 3.21Zea mays3E-90199667813 (13)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cytochrom_B561(3) MotB_plug(2)
TargetP: Secreted (Class 2 C0.002; M0.222; S0.975; _0.015)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 239 aa (-cTP 233)
Molecular Weight 25.86 kDA(-cTP )
PI 6.70(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
15539469(vacuole)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19888209(80S polysomal fraction)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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