PPDB

PPDB	The Plant Proteome Database

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AT4G25500.3 arginine/serine-rich splicing factor 35

Lab Annot.

arginine/serine-rich splicing factor 35
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25500.6 11 Arabidopsis thaliana 0 317 100 100 0 (0) _
AT4G25500.1 11 Arabidopsis thaliana 0 315 100 100 1 (0) _
AT4G25500.4 11 Arabidopsis thaliana 0 315 100 100 1 (0) _
Os02g03040.3 7 Oryza sativa 3E-86 251 63 72 0 (0) _
Os02g03040.4 7 Oryza sativa 3E-86 251 63 72 0 (0) _
Os02g03040.1 7 Oryza sativa 8E-85 249 63 72 0 (0) _
v1_GRMZM2G121269_P02 4a53 Zea mays 5E-79 200 65 79 26 (26) _
GRMZM2G121269_P02 3.21 Zea mays 5E-79 200 65 79 17 (16) _
Zm00001eb208490_P001 agpv5 Zea mays 2E-78 199 65 78 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DbpA(2) Nup35_RRM_2(2) RNA_bind(1) RRM_1(2) RRM_5(2)
TargetP:	Cytoplasm (Class 3 C0.308; M0.052; S0.032; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	317 aa (-cTP 260)
Molecular Weight	36.40 kDA(-cTP )
PI	10.41(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data