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PPDB	The Plant Proteome Database

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AT4G25500.1 arginine/serine-rich splicing factor 35

Lab Annot.

arginine/serine-rich splicing factor 35
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

TAIR curated location: nuclear speck15133128

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25500.4 11 Arabidopsis thaliana 0 350 100 100 1 (0) _
AT4G25500.6 11 Arabidopsis thaliana 0 315 100 100 0 (0) _
AT4G25500.3 11 Arabidopsis thaliana 0 315 100 100 0 (0) _
Os02g03040.1 7 Oryza sativa 5E-107 284 64 75 0 (0) _
Os02g03040.2 7 Oryza sativa 2E-106 272 65 76 0 (0) _
Os02g03040.4 7 Oryza sativa 2E-85 250 63 72 0 (0) _
Zm00001eb230540_P001 agpv5 Zea mays 4E-98 284 61 72 0 (0) _
GRMZM5G872147_P02 3.21 Zea mays 4E-98 284 61 72 20 (19) _
Zm00001eb208490_P004 agpv5 Zea mays 7E-98 234 65 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DbpA(2) DUF2129(2) Nup35_RRM_2(2) RNA_bind(2) RRM_1(2) RRM_3(2) RRM_5(2)
TargetP:	Cytoplasm (Class 2 C0.027; M0.158; S0.064; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	350 aa (-cTP 345)
Molecular Weight	40.32 kDA(-cTP )
PI	10.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data