PPDB

The Plant Proteome Database

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AT4G25500.1   arginine/serine-rich splicing factor 35

Lab Annot. arginine/serine-rich splicing factor 35
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
TAIR curated location: nuclear speck15133128
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G25500.4 11Arabidopsis thaliana03501001000 (0)_
AT4G25500.6 11Arabidopsis thaliana03151001000 (0)_
AT4G25500.3 11Arabidopsis thaliana03151001000 (0)_
Os02g03040.1 7Oryza sativa5E-10728464750 (0)_
Os02g03040.2 7Oryza sativa2E-10627265760 (0)_
Os02g03040.4 7Oryza sativa2E-8525063720 (0)_
Zm00001eb230540_P001 agpv5Zea mays4E-9828461720 (0)_
GRMZM5G872147_P02 3.21Zea mays4E-98284617219 (19)_
Zm00001eb208490_P004 agpv5Zea mays7E-9823465790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DbpA(2) DUF2129(2) Nup35_RRM_2(2) RNA_bind(2) RRM_1(2) RRM_3(2) RRM_5(2)
TargetP: Cytoplasm (Class 2 C0.027; M0.158; S0.064; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 350 aa (-cTP 345)
Molecular Weight 40.32 kDA(-cTP )
PI 10.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19253305(phosphoproteins (etiolated seedling))
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help