PPDB

PPDB	The Plant Proteome Database

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AT4G25440.1 zinc finger WD40 repeat protein 1

Lab Annot.

Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G25440.3 11 Arabidopsis thaliana 0 430 100 100 0 (0) _
AT4G25440.2 11 Arabidopsis thaliana 0 430 100 100 0 (0) _
AT5G51980.1 11 Arabidopsis thaliana 0 436 83 91 0 (0) _
Os02g45480.1 7 Oryza sativa 0 437 58 75 0 (0) _
Os02g45480.2 7 Oryza sativa 4E-130 347 55 71 0 (0) _
Os02g45480.4 7 Oryza sativa 7E-125 238 67 86 0 (0) _
Zm00001eb250580_P003 agpv5 Zea mays 1E-177 430 57 73 0 (0) _
v1_GRMZM2G037200_P02 4a53 Zea mays 1E-177 430 57 73 1 (1) _
GRMZM2G037200_P02 3.21 Zea mays 1E-177 430 57 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(4) Ge1_WD40(2) Nucleoporin_N(2) Nup160(4) PQQ_3(1) Torus(2) WD40(6)
TargetP:	Cytoplasm (Class 3 C0.264; M0.147; S0.006; _0.732)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	430 aa (-cTP 369)
Molecular Weight	46.66 kDA(-cTP )
PI	7.08(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data