PPDB

The Plant Proteome Database

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AT4G25433.1   peptidoglycan-binding LysM domain-containing protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G62150.1 11Arabidopsis thaliana4E-285574900 (0)S
AT3G52790.1 11Arabidopsis thaliana6E-2210439610 (0)S
Os03g02685.1 7Oryza sativa7E-297660760 (0)M
Os04g48380.1 7Oryza sativa4E-264887970 (0)M
Os10g38040.1 7Oryza sativa4E-245669910 (0)M
Zm00001eb021470_P001 agpv5Zea mays2E-3010153680 (0)S
v1_GRMZM2G434514_P01 4a53Zea mays2E-3010153680 (0)S
GRMZM2G434514_P01 3.21Zea mays2E-3010153680 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2845(1) LysM(1)
TargetP: Secreted (Class 3 C0.004; M0.250; S0.824; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 110 aa (-cTP 102)
Molecular Weight 12.21 kDA(-cTP )
PI 5.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help