PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G25410.1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51790.1 11Arabidopsis thaliana4E-8419068800 (0)_
AT5G51790.3 11Arabidopsis thaliana2E-8319567780 (0)_
AT5G51790.4 11Arabidopsis thaliana8E-6916767800 (0)_
Os01g72370.2 7Oryza sativa2E-0915825530 (0)_
Os01g72370.1 7Oryza sativa2E-0915825530 (0)_
Os01g72370.3 7Oryza sativa1E-0815825530 (0)_
GRMZM2G082586_P01 3.21Zea mays3E-078731560 (0)_
Zm00001eb315610_P002 agpv5Zea mays3E-078731560 (0)_
v1_GRMZM2G082586_P01 4a53Zea mays3E-078731560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4043(1) HLH(1)
TargetP: Cytoplasm (Class 4 C0.118; M0.379; S0.017; _0.747)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 221 aa (-cTP 201)
Molecular Weight 24.46 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help