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AT4G25290.1 DNA photolyase

Lab Annot.

deoxyribodipyrimidine photolyase protein / DNA photolyase protein
Mapman: 28.2 DNA.repair; 26.57* misc.alpha/beta-Hydrolase family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G36530.1 11 Arabidopsis thaliana 2E-34 296 32 48 48 (44) _
AT4G36530.2 11 Arabidopsis thaliana 8E-34 296 32 48 48 (44) C
AT5G19850.1 11 Arabidopsis thaliana 8E-29 290 33 48 20 (10) C
Os09g36240.1 7 Oryza sativa 0 643 51 68 9 (9) M
Os09g36240.3 7 Oryza sativa 0 643 51 68 9 (9) M
Os09g36240.4 7 Oryza sativa 0 556 51 68 9 (9) M
GRMZM2G104608_P02 3.21 Zea mays 0 700 50 67 63 (35) M
Zm00001eb319610_P003 agpv5 Zea mays 0 700 50 67 0 (0) M
Zm00001eb319610_P002 agpv5 Zea mays 0 567 50 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_1(2) Abhydrolase_4(2) Abhydrolase_6(1) DNA_photolyase(1) DUF2920(2)
TargetP:	Mitochondria (Class 3 C0.167; M0.716; S0.014; _0.153)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	692 aa (-cTP 663)
Molecular Weight	78.27 kDA(-cTP )
PI	6.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2289	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

19888209(80S polysomal fraction)

Comparative Proteomics Data