PPDB

PPDB	The Plant Proteome Database

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AT4G25270.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

OTP70 - pentatricopeptide (PPR) repeat protein (splice factor)
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 21288264 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G46790.1 11 Arabidopsis thaliana 4E-99 446 37 60 1 (1) C
AT2G22070.1 11 Arabidopsis thaliana 1E-91 506 34 52 0 (0) _
AT2G13600.1 11 Arabidopsis thaliana 3E-90 486 34 54 0 (0) _
Os03g63560.1 7 Oryza sativa 9E-128 405 47 64 0 (0) C
Os12g36620.1 7 Oryza sativa 9E-94 437 36 59 0 (0) _
Os06g41040.1 7 Oryza sativa 1E-92 435 34 61 0 (0) _
Zm00001eb083880_P002 agpv5 Zea mays 3E-89 437 35 57 0 (0) _
Zm00001eb110890_P001 agpv5 Zea mays 8E-89 452 38 55 0 (0) M
Zm00001eb083880_P005 agpv5 Zea mays 1E-88 437 35 57 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2767(2) PPR(9) PPR_1(9) PPR_2(9) PPR_3(6) PPR_long(4) RNPP_C(3) TPR_1(1) TPR_
TargetP:	Chloroplast (Class 2 C0.919; M0.046; S0.018; _0.146)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	527 aa (-cTP 480)
Molecular Weight	59.53 kDA(-cTP 54.08)
PI	6.60(-cTP 5.88)

Experimental Evidence

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* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data