PPDB

The Plant Proteome Database

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AT4G25200.1   mitochondrion-localized small heat shock protein 23.6

Lab Annot. small heat shock protein SHSP 23.6 - Class MI
Mapman: 20.2.1 stress.abiotic.heat
Curated Location mitochondria (Pubmed: 18369739 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G51440.1 11Arabidopsis thaliana1E-8721566781 (0)M
AT4G27670.1 11Arabidopsis thaliana6E-2913343637 (7)C
AT1G52560.1 11Arabidopsis thaliana3E-1817631550 (0)M
Os02g52150.2 7Oryza sativa1E-40226446416 (16)S
Os06g11610.1 7Oryza sativa3E-40198436110 (10)M
Os02g52150.1 7Oryza sativa3E-3822743636 (6)S
Zm00001eb193940_P002 agpv5Zea mays1E-3521642620 (0)M
GRMZM2G007729_P02 3.21Zea mays1E-35216426241 (41)M
v1_GRMZM2G007729_P02 4a53Zea mays1E-35216426234 (34)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) HSP20(1)
TargetP: Mitochondria (Class 3 C0.353; M0.811; S0.057; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 210 aa (-cTP 177)
Molecular Weight 23.61 kDA(-cTP )
PI 6.46(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2123Detail       leaf [A. thaliana] Stroma stromaWild typre

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
16502469(cell suspension-Cd-up)
18436743(specific to seeds)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help