PPDB

The Plant Proteome Database

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AT4G24990.1   Ubiquitin family protein

Lab Annot. Ubiquitin protein
Mapman: 29.5.11.1 protein.degradation.ubiquitin.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G24990.2 11Arabidopsis thaliana8E-831181001000 (0)_
AT3G26980.1 11Arabidopsis thaliana4E-4912058780 (0)_
AT1G22050.1 11Arabidopsis thaliana7E-3411747710 (0)_
Os04g32270.1 7Oryza sativa1E-4611065772 (2)_
Os02g51500.2 7Oryza sativa1E-3811546730 (0)_
Os04g32270.2 7Oryza sativa2E-389168792 (2)_
GRMZM2G153215_P01 3.21Zea mays8E-4611163770 (0)_
Zm00001eb085200_P001 agpv5Zea mays3E-4511163760 (0)_
Zm00001eb085200_P002 agpv5Zea mays3E-4511163760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rad60-SLD_2(1) ubiquitin(1)
TargetP: Cytoplasm (Class 2 C0.089; M0.108; S0.074; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 118 aa (-cTP 75)
Molecular Weight 12.84 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help