PPDB

 The Plant Proteome Database

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AT4G24972.1   tapetum determinant 1
Lab Annot. TPD1 (TAPETUM DETERMINANT 1)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32583.2 11Arabidopsis thaliana3E-4512355700 (0)S
AT1G32583.1 11Arabidopsis thaliana3E-4512355700 (0)S
Os12g28750.1 7Oryza sativa2E-3511246660 (0)M
Os10g14020.1 7Oryza sativa5E-2517734500 (0)S
Os02g30780.1 7Oryza sativa9E-088930510 (0)S
GRMZM2G027522_P01 3.21Zea mays9E-3511447640 (0)S
Zm00001eb408950_P001 agpv5Zea mays9E-3511447640 (0)S
v1_GRMZM2G027522_P01 4a53Zea mays9E-3511447640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Secreted (Class 3 C0.006; M0.197; S0.602; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 176 aa (-cTP 92)
Molecular Weight 19.46 kDA(-cTP )
PI 9.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help