PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G24840.1 oligomeric golgi complex subunit-like protein

Lab Annot.

COG (conserved oligomeric Golgi) complex component, COG2
Mapman: 29.3.4.2 protein.targeting.secretory pathway.golgi

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os03g63250.1 7 Oryza sativa 0 761 58 73 15 (15) _
Os03g63250.2 7 Oryza sativa 0 639 59 73 15 (15) _
GRMZM2G123843_P02 3.21 Zea mays 0 763 58 73 2 (0) _
v1_GRMZM2G123843_P02 4a53 Zea mays 0 763 58 73 0 (0) _
Zm00001eb064480_P002 agpv5 Zea mays 0 763 58 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Amidohydro_2(1) ArAE_1_C(2) COG2(2) DUF3510(2) Snapin_Pallidin(2) Vps51(1)
TargetP:	Cytoplasm (Class 5 C0.647; M0.030; S0.058; _0.652)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	756 aa (-cTP 744)
Molecular Weight	84.62 kDA(-cTP )
PI	5.53(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data