PPDB

The Plant Proteome Database

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AT4G24810.1   Protein kinase superfamily protein

Lab Annot. ABC1 kinase 12A (ABC1K12A) (mitochondria and/or plastid?)
Mapman: 26.56* misc.ABC1k family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G24810.6 11Arabidopsis thaliana04381001000 (0)_
AT4G24810.2 11Arabidopsis thaliana043810010012 (9)_
AT4G24810.3 11Arabidopsis thaliana044598988 (5)_
Os01g67720.1 7Oryza sativa041766800 (0)_
Os01g67720.3 7Oryza sativa3E-14028168810 (0)_
Os01g67720.2 7Oryza sativa4E-13927769810 (0)_
Zm00001eb365530_P003 agpv5Zea mays037466800 (0)M
Zm00001eb144330_P001 agpv5Zea mays036666800 (0)M
GRMZM5G884972_P02 3.21Zea mays043166813 (3)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ABC1(1) APH(4) Pkinase(1) RIO1(2)
TargetP: Cytoplasm (Class 1 C0.051; M0.113; S0.070; _0.937)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 438 aa (-cTP 365)
Molecular Weight 49.34 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help