|
AT4G24780.1
Pectin lyase-like superfamily protein
|
| Lab Annot. |
pectate lyase protein
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases |
| Curated Location |
|
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
|
Related Genes
|
#Spots: The number of publicly accessible spots are in parenthesis
|
| Prediction |
| PFAM: |
Beta_helix(1) NosD(1) Pectate_lyase_4(1) |
| TargetP: |
Secreted (Class 1 C0.009; M0.037; S0.978; _0.045) |
| Predotar: |
|
| Subcel. Location: |
|
| TM-HMM prediction: |
No |
| Aramemnon: |
|
| TAT position: |
|
| Length |
408 aa (-cTP 366) |
| Molecular Weight |
45.01 kDA(-cTP ) |
| PI |
8.44(-cTP ) |
|
|
Experimental Evidence
Expand
View Identified Peptides
View GeneModel
|
| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 324 | Detail | | | | | | | | leaf [A. thaliana] | cell wall enriched | wild-type |
| 1113 | Detail | | | | | | | | [A. thaliana] | control for RARE-1 co-IP | wild-type |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1431 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | wild-type (rep. 2) |
| 1534 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 40 uM CAP | clps (rep. 1) |
| 2286 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2296 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2298 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
| 2299 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2301 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2304 | Detail | | | | | | | | [A. thaliana] | | Clp C1 WT |
* For details about the exprimental sources
click here.
|
|
Published Proteomics Data
|
17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
|
|
Comparative Proteomics Data
|
|
