PPDB

The Plant Proteome Database

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AT4G24680.1   modifier of snc1

Lab Annot. modifier of snc1
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G24680.2 11Arabidopsis thaliana0142799990 (0)_
AT4G24680.3 11Arabidopsis thaliana0142798980 (0)_
AT4G24680.5 11Arabidopsis thaliana0142798980 (0)_
Os12g37860.1 7Oryza sativa2E-5244439512 (2)M
GRMZM2G424181_P01 3.21Zea mays4E-6162335480 (0)M
Zm00001eb028710_P001 agpv5Zea mays4E-6162335480 (0)M
Zm00001eb028710_P002 agpv5Zea mays7E-6162335480 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BAT2_N(4)
TargetP: Cytoplasm (Class 5 C0.092; M0.412; S0.001; _0.460)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1427 aa (-cTP 1404)
Molecular Weight 155.37 kDA(-cTP )
PI 9.38(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help