PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G24630.1   DHHC-type zinc finger family protein

Lab Annot. receptor/ zinc ion binding
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G50020.3 11Arabidopsis thaliana041671810 (0)_
AT5G50020.2 11Arabidopsis thaliana041671810 (0)_
AT5G50020.1 11Arabidopsis thaliana041669800 (0)_
Os05g36090.1 7Oryza sativa1E-17341958720 (0)_
Os01g64810.2 7Oryza sativa3E-16440657710 (0)_
Os01g64810.1 7Oryza sativa3E-16440657710 (0)_
GRMZM2G100641_P01 3.21Zea mays5E-17641359720 (0)_
Zm00001eb289180_P001 agpv5Zea mays5E-17641359720 (0)_
v1_GRMZM2G100641_P01 4a53Zea mays5E-17641359720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DHHC(2) DUF680(1) GWT1(2)
TargetP: Cytoplasm (Class 5 C0.002; M0.725; S0.005; _0.731)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 407 aa (-cTP 359)
Molecular Weight 46.75 kDA(-cTP )
PI 8.71(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help