PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G24580.1 Rho GTPase activation protein (RhoGAP) with PH domain-containing protein

Lab Annot.

Rho GTPase activation protein (RhoGAP) with PH domain
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G24580.2 11 Arabidopsis thaliana 0 920 100 100 0 (0) _
AT4G24580.3 11 Arabidopsis thaliana 0 692 99 100 0 (0) _
AT5G12150.1 11 Arabidopsis thaliana 0 816 47 63 0 (0) C
Os07g46450.1 7 Oryza sativa 0 841 49 64 0 (0) C
Os03g24180.1 7 Oryza sativa 0 853 47 62 0 (0) C
Os03g11140.4 7 Oryza sativa 1E-157 431 61 76 0 (0) _
Zm00001eb329690_P002 agpv5 Zea mays 0 823 48 65 0 (0) C
GRMZM2G036872_P01 3.21 Zea mays 0 822 48 64 0 (0) M
v1_GRMZM2G036872_P01 4a53 Zea mays 0 822 48 64 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ABC_tran_CTD(3) Lzipper-MIP1(2) PH(2) PH_11(2) PH_8(1) RhoGAP(1)
TargetP:	Cytoplasm (Class 3 C0.143; M0.138; S0.024; _0.550)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	920 aa (-cTP 915)
Molecular Weight	100.63 kDA(-cTP )
PI	5.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1260	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 1) thylakoid membrane	wild-type
1262	Detail								leaf [A. thaliana]	co-IP SHOOT1 (rep. 2) thylakoid membrane	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19995728(proplastid (Brassica napus))
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data