PPDB

The Plant Proteome Database

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AT4G24560.1   ubiquitin-specific protease 16

Lab Annot. ubiquitin-specific protease 16 (UBP16)
Mapman: 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G65450.1 11Arabidopsis thaliana7E-12838953670 (0)M
AT5G65450.2 11Arabidopsis thaliana2E-12738953670 (0)M
AT2G24640.1 11Arabidopsis thaliana3E-11137846630 (0)S
Os08g37350.1 7Oryza sativa2E-13650248620 (0)C
Os09g28940.1 7Oryza sativa1E-12936455710 (0)S
Os02g14730.1 7Oryza sativa5E-10533847650 (0)S
Zm00001eb038400_P002 agpv5Zea mays6E-14038357700 (0)_
Zm00001eb038400_P001 agpv5Zea mays6E-14038357700 (0)_
GRMZM2G136443_P01 3.21Zea mays2E-13748549630 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: UCH(1) UCH_1(1) zf-MYND(3)
TargetP: Secreted (Class 2 C0.014; M0.044; S0.738; _0.036)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 1008 aa (-cTP 954)
Molecular Weight 110.60 kDA(-cTP )
PI 6.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20516081(tagged-26S proteasome-affinity)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help