PPDB

The Plant Proteome Database

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AT4G24550.2   Clathrin adaptor complexes medium subunit family protein

Lab Annot. Clathrin adaptor complexes medium subunit protein
Mapman: 29.3.4.99 protein.targeting.secretory pathway.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G24550.3 11Arabidopsis thaliana03769910036 (13)_
AT4G24550.1 11Arabidopsis thaliana037410010038 (15)_
AT1G10730.1 11Arabidopsis thaliana1E-8245032523 (3)M
Os07g42810.2 7Oryza sativa045181886 (6)_
Os07g42810.1 7Oryza sativa045181886 (6)_
Os01g50770.1 7Oryza sativa4E-8445131542 (2)M
GRMZM2G031360_P01 3.21Zea mays0451828832 (2)_
v1_GRMZM2G031360_P01 4a53Zea mays045182882 (2)_
Zm00001eb076390_P001 agpv5Zea mays045182880 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Adap_comp_sub(1) Clat_adaptor_s(1)
TargetP: Cytoplasm (Class 4 C0.018; M0.420; S0.070; _0.751)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 451 aa (-cTP 429)
Molecular Weight 50.95 kDA(-cTP )
PI 7.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP
2599Detail       Rosettes [A. thaliana] total leaf tissue fmtclpc1
2601Detail       Rosettes [A. thaliana] total leaf tissue fmtclpc1
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1
2603Detail       Rosettes [A. thaliana] total leaf tissue clpc1
2604Detail       Rosettes [A. thaliana] Total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


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