PPDB

 The Plant Proteome Database

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AT4G24510.1   HXXXD-type acyl-transferase family protein
Lab Annot. HXXXD-type acyl-transferase protein
Mapman: 11.1.11 lipid metabolism.FA synthesis and FA elongation.fatty acid elongase
Curated Location
TAIR curated location: nucleus9390429
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G13840.1 11Arabidopsis thaliana9E-75422345344 (13)M
AT3G23840.1 11Arabidopsis thaliana1E-7142836531 (1)_
AT4G29250.1 11Arabidopsis thaliana7E-1445321440 (0)_
Os04g52164.1 7Oryza sativa3E-67433345435 (35)_
Os04g52164.2 7Oryza sativa1E-3716647658 (8)_
Os10g03360.1 7Oryza sativa3E-1113831470 (0)_
Zm00001eb071110_P001 agpv5Zea mays1E-7341834540 (0)_
v1_GRMZM2G098239_P01 4a53Zea mays1E-73418345469 (69)_
GRMZM2G098239_P01 3.21Zea mays1E-734183454100 (78)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Transferase(1)
TargetP: Cytoplasm (Class 4 C0.258; M0.057; S0.120; _0.580)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 421 aa (-cTP 405)
Molecular Weight 47.24 kDA(-cTP )
PI 5.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 19253305(phosphoproteins (etiolated seedling))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help