PPDB

PPDB	The Plant Proteome Database

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AT4G24430.1 Rhamnogalacturonate lyase family protein

Lab Annot.

Rhamnogalacturonate lyase protein
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G24430.2 11 Arabidopsis thaliana 0 528 100 100 0 (0) _
AT1G09890.4 11 Arabidopsis thaliana 0 634 61 78 0 (0) _
AT1G09890.1 11 Arabidopsis thaliana 0 623 61 78 0 (0) _
Os08g44020.3 7 Oryza sativa 0 633 59 74 0 (0) _
Os08g44020.1 7 Oryza sativa 0 633 59 74 0 (0) _
Os08g44020.2 7 Oryza sativa 0 633 59 74 0 (0) _
v1_GRMZM2G154124_P01 4a53 Zea mays 0 634 58 74 0 (0) _
GRMZM2G154124_P01 3.21 Zea mays 0 634 58 74 0 (0) _
Zm00001eb039820_P001 agpv5 Zea mays 0 634 58 74 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CarbopepD_reg_2(2) CBM-like(1) DUF2012(2) fn3_3(1) Rhamnogal_lyase(1)
TargetP:	Cytoplasm (Class 2 C0.164; M0.119; S0.125; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	646 aa (-cTP 628)
Molecular Weight	73.61 kDA(-cTP )
PI	5.04(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)

Comparative Proteomics Data